Bioinformatics: Using the Ensembl Genome Browser
Provided by: GSLS
Tue 27 Nov 2012 – Department of Genetics, Room G12
- Dates available:
- Fri 21 Jun 2013 09:30 [Places]
- Fri 29 Nov 2013 09:30 Not bookable
|
Bookings cannot be made on this event
(Event is completed) The following alternative date is available: Fri 21 Jun 2013 Register your interest - if you cannot make any of the currently scheduled dates and would be interested in additional dates being scheduled. |
Description: The Ensembl project provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This one-day workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information. Further information is available.
Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by email.
Target audience:
- All University members (this includes colleges and departments)
- External participants (where spaces are available)
- The workshop is primarily targeted at wetlab researchers
- Further details regarding Graduate School of Life Sciences' eligibility criteria are available
Duration: One full day session
Sessions:
Number of sessions: 1
| Date | Time | Venue | Trainer |
|---|---|---|---|
| Tue 27 Nov | 09:30 - 17:30 | Department of Genetics, Room G12 | Giullietta Spudich , Denise Carvalho-Silva , Emily Pritchard |
Format: Presentations, demonstrations and practicals
Frequency: A number of times per year
Prerequisites:
- Basic computing skills
- Graduate level in Life Sciences
Aims: To enable participants to browse the Ensembl Databases with confidence
Topics covered (session 1):
- Introduction to Ensembl: origin, goals and organization of the Ensembl project
- Worked example: guided tour of the most important pages of the Ensembl website
- Data mining with BioMart: retrieving datasets using the data mining tool BioMart
- Evaluating genes and transcripts: how are Ensembl gene and transcripts predictions made?
Notes:
- None of our current courses require you to bring your own computer, however, if you want to bring a laptop and have it online we can arrange access via the University Lapwing wireless service
- Participants are encouraged to bring problems/questions about their research to try to tackle these during the workshop using Ensembl
Theme: SBS Practical Bioinformatics Training: Specialized Topics
