Introduction to Galaxy: RNA-seq and ChIP-seq data analysis
Galaxy (http://galaxyproject.org/) is an open, web-based platform for data intensive life science research that enables non-bioinformaticians to create, run, tune, and share bioinformatic analyses. The goal of this course is to demonstrate how to use Galaxy to explore RNA-seq data, for expression profiling, and ChIP-seq data, to assess genomic DNA binding sites. You will learn how to perform analysis in Galaxy, and then how to share, repeat, and reproduce your analyses.
The timetable for this event can be found here.
Please note that if you are not eligible for a University of Cambridge Raven account you will need to Book by linking here.
- Graduate students, Postdocs and Staff members from the University of Cambridge, Affiliated Institutions and other external Institutions or individuals
- Further details regarding eligibility criteria are available here
- Further details regarding the charging policy are available here
Number of sessions: 2
| # | Date | Time | Venue | Trainer |
|---|---|---|---|---|
| 1 | Thu 11 Jun 2015 09:30 - 17:00 | 09:30 - 17:00 | Bioinformatics Training Room, Craik-Marshall Building | Dave Clements |
| 2 | Fri 12 Jun 2015 09:30 - 16:00 | 09:30 - 16:00 | Bioinformatics Training Room, Craik-Marshall Building | Dave Clements |
- Introduction to Galaxy
- Overview of tools for RNA-seq and ChIP-seq analysis
- Example workflows for RNA-seq and ChIP-seq analysis
- Data visualisation
- Data sharing, pubishing and reproducibility
Presentation and demonstrations
Two full day sessions
A number of times per year
Booking / availability